Roseovarius sp. TE539

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius sp. TE539 is a Gram-negative bacterium characterized by its single replicon. It is cataloged under the accession number QNGB00000000.1, which provides a unique identifier for its genomic information. As a member of the Roseovarius genus, this bacterium likely shares common traits with other species within this group, including potential ecological roles in marine environments, although specific ecological interactions for Roseovarius sp. TE539 are not detailed in the provided data. The Gram-negative characteristic indicates that Roseovarius sp. TE539 possesses a thinner peptidoglycan layer and an outer membrane, which is typical for such bacteria. This structural feature can influence its interactions with other microorganisms and its survival in various environments. Overall, understanding the genomic features and classification of Roseovarius sp. TE539 may provide insights into its ecological role, particularly in marine ecosystems where members of the Roseovarius genus are often found. The single replicon suggests a streamlined genome that could be advantageous for adaptability in fluctuating environments, although specific adaptations remain unspecified in the available data. Thus, further research may elucidate the ecological significance of Roseovarius sp. TE539 in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius sp. TE539
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius sp. TE539 contig83, whole genome shotgun sequence.

Gene Summary

Adenine Count

678553 bp

Thymine Count

684510 bp

Guanine Count

1180291 bp

Cytosine Count

1171973 bp

Genome Length

3715327 bp

Protein-coding Genes

3458 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxybenzoate 3-monooxygenaseDQW77_15840Not AvailableNegative3282435 - 328360443277.2
duf1289 domain-containing proteinDQW77_15845Not AvailableNegative3283821 - 32840579099.09
holliday junction resolvase ruvxDQW77_15850Not AvailableNegative3284054 - 328453017347.9
c-type cytochrome biogenesis protein ccmiDQW77_15855Not AvailableNegative3284527 - 328575343986.3
sarcosine oxidase subunit betaDQW77_15860Not AvailablePositive3285968 - 328721245188.2
hypothetical proteinDQW77_15865Not AvailablePositive3287212 - 328750810405.9
sarcosine oxidase subunit deltaDQW77_15870Not AvailablePositive3287508 - 328783712318.4
sarcosine oxidase subunit alpha family proteinDQW77_15875Not AvailablePositive3287834 - 3290845108818.0
sarcosine oxidase subunit gammaDQW77_15880Not AvailablePositive3290838 - 329141319994.9
superoxide dismutaseDQW77_15885Not AvailablePositive3291543 - 329214222214.7

Displaying genes 3151 – 3160 of 3532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.