Phytoactinopolyspora halophila strain YIM 96934

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Jiangellales

Family

Jiangellaceae

Genus

Phytoactinopolyspora

Description

Phytoactinopolyspora halophila strain YIM 96934 is a unique bacterial strain characterized by its single replicon structure. This trait may contribute to its genomic stability and efficiency in replication, which is vital for its survival in various environments. The strain is cataloged under the accession number QMIG00000000.1, indicating its identification and classification within microbial databases. While specific ecological or biological functions of Phytoactinopolyspora halophila strain YIM 96934 are not detailed in the provided evidence, the genus Phytoactinopolyspora is often associated with soil and plant environments, suggesting that this strain may play a role in nutrient cycling or plant interactions. As a halophilic organism, it is likely adapted to thrive in saline conditions, which can influence soil health and plant growth in such habitats. The presence of a single replicon can also indicate a streamlined metabolism and adaptability, traits that may be advantageous in fluctuating environments. Understanding the characteristics and ecological roles of strains like YIM 96934 helps elucidate the complex interactions within microbial communities and their contributions to ecosystem functions, particularly in saline environments where such organisms are essential for maintaining soil health and supporting plant life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderJiangellales
FamilyJiangellaceae
GenusPhytoactinopolyspora
SpeciesPhytoactinopolyspora halophila
Strainstrain YIM 96934

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phytoactinopolyspora halophila strain YIM 96934 Scaffold73_1,

Gene Summary

Adenine Count

848924 bp

Thymine Count

834070 bp

Guanine Count

1652522 bp

Cytosine Count

1710749 bp

Genome Length

5046265 bp

Protein-coding Genes

4406 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseDPM12_16020Not AvailablePositive3501377 - 350217427790.7
abc transporter atp-binding proteinDPM12_16025Not AvailablePositive3502239 - 350391561844.2
50s ribosomal protein l13DPM12_16030Not AvailablePositive3505864 - 350630716632.3
30s ribosomal protein s9DPM12_16035Not AvailablePositive3506345 - 350682417366.6
phosphoglucosamine mutaseDPM12_16040Not AvailablePositive3506993 - 350833946733.6
gnat family n-acetyltransferaseDPM12_16045Not AvailableNegative3508376 - 350936837410.6
hypothetical proteinDPM12_16050Not AvailableNegative3509438 - 351022327144.7
type i pantothenate kinaseDPM12_16055Not AvailableNegative3510274 - 351123936361.6
glutamine--fructose-6-phosphate transaminase (isomerizing)DPM12_16060Not AvailablePositive3511327 - 351317465974.8
hypothetical proteinDPM12_16065Not AvailableNegative3513233 - 351371217017.6

Displaying genes 3161 – 3170 of 4459 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.