Paenibacillus contaminans strain CKOBP-6

rodaerobic / facultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus contaminans strain CKOBP-6 is a Gram-positive, aerobic bacterium characterized by its rod-shaped morphology. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature environments. It is also notable for being spore-forming, which provides it with a survival advantage in various conditions by allowing it to withstand environmental stress. The strain has been cataloged with the accession number QMFB00000000.1, which serves as a unique identifier for researchers interested in studying its genetic and phenotypic characteristics. With only one replicon, Paenibacillus contaminans strain CKOBP-6 may have a streamlined genome, potentially influencing its metabolic capabilities and ecological interactions. Given its aerobic nature and mesophilic growth preferences, Paenibacillus contaminans strain CKOBP-6 likely plays a role in nutrient cycling within its habitat, potentially contributing to organic matter decomposition. Its ability to form spores suggests that it can persist in environments that may not always be favorable for growth, thereby maintaining ecological balance. The study of such traits may provide insights into the ecological functions of Paenibacillus species in various ecosystems, particularly in the decomposition processes and soil health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus contaminans
Strainstrain CKOBP-6

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic / facultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus contaminans strain CKOBP-6 scaffold108, whole genome

Gene Summary

Adenine Count

2483732 bp

Thymine Count

2477677 bp

Guanine Count

2632913 bp

Cytosine Count

2638044 bp

Genome Length

10232629 bp

Protein-coding Genes

8089 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3388 domain-containing proteinDQG23_00715Not AvailablePositive131644 - 13240829467.4
duf4115 domain-containing proteinDQG23_00720Not AvailablePositive132453 - 13331332060.3
yajq family cyclic di-gmp-binding proteinDQG23_00725Not AvailablePositive133798 - 13429518543.4
30s ribosomal protein s12 methylthiotransferase rimoDQG23_00730Not AvailablePositive134426 - 13575450003.1
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseDQG23_00735Not AvailablePositive135751 - 13633221593.2
competence/damage-inducible protein aDQG23_00740Not AvailablePositive136502 - 13777345916.4
recombinase recaDQG23_00745Not AvailablePositive138117 - 13916337572.0
recx family transcriptional regulatorDQG23_00750Not AvailablePositive139346 - 14000525716.6
ribonuclease yDQG23_00755Not AvailablePositive140258 - 14180557815.3
tigr00282 family metallophosphoesteraseDQG23_00760Not AvailablePositive141904 - 14269528875.0

Displaying genes 251 – 260 of 8227 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.