Paenibacillus contaminans strain CKOBP-6

rodaerobic / facultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus contaminans strain CKOBP-6 is a Gram-positive, aerobic bacterium characterized by its rod-shaped morphology. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature environments. It is also notable for being spore-forming, which provides it with a survival advantage in various conditions by allowing it to withstand environmental stress. The strain has been cataloged with the accession number QMFB00000000.1, which serves as a unique identifier for researchers interested in studying its genetic and phenotypic characteristics. With only one replicon, Paenibacillus contaminans strain CKOBP-6 may have a streamlined genome, potentially influencing its metabolic capabilities and ecological interactions. Given its aerobic nature and mesophilic growth preferences, Paenibacillus contaminans strain CKOBP-6 likely plays a role in nutrient cycling within its habitat, potentially contributing to organic matter decomposition. Its ability to form spores suggests that it can persist in environments that may not always be favorable for growth, thereby maintaining ecological balance. The study of such traits may provide insights into the ecological functions of Paenibacillus species in various ecosystems, particularly in the decomposition processes and soil health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus contaminans
Strainstrain CKOBP-6

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic / facultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus contaminans strain CKOBP-6 scaffold108, whole genome

Gene Summary

Adenine Count

2483732 bp

Thymine Count

2477677 bp

Guanine Count

2632913 bp

Cytosine Count

2638044 bp

Genome Length

10232629 bp

Protein-coding Genes

8089 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tdeiii family type ii restriction endonucleaseDQG23_00270Not AvailablePositive39343 - 4013730042.4
hypothetical proteinDQG23_00275Not AvailableNegative40234 - 4135839990.6
hypothetical proteinDQG23_00280Not AvailablePositive41721 - 419819995.97
adp-forming succinate--coa ligase subunit betaDQG23_00285Not AvailablePositive42438 - 4359841329.1
succinate--coa ligase subunit alphaDQG23_00290Not AvailablePositive43636 - 4456832291.6
dna-protecting protein dpraDQG23_00295Not AvailablePositive44748 - 4584839460.1
type i dna topoisomeraseDQG23_00300Not AvailablePositive45885 - 4796378299.8
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoDQG23_00305Not AvailablePositive48150 - 4947548434.4
hslu--hslv peptidase proteolytic subunitDQG23_00310Not AvailablePositive49618 - 5016019573.8
hslu--hslv peptidase atpase subunitDQG23_00315Not AvailablePositive50272 - 5166952380.5

Displaying genes 161 – 170 of 8227 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.