Desulfobacter hydrogenophilus strain DSM 3380

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfobacter

Description

Desulfobacter hydrogenophilus strain DSM 3380 is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This trait is significant as it highlights the organism's ability to participate in anaerobic metabolic processes, often involving the reduction of sulfate or other electron acceptors. The strain has a single replicon, which is notable for its genomic organization. This characteristic can influence its replication and maintenance during cellular processes. The genomic information of Desulfobacter hydrogenophilus is accessible under the accession number QLNI00000000.1, providing a resource for researchers interested in studying its genetic makeup and metabolic pathways. In an ecological context, organisms like Desulfobacter hydrogenophilus play a crucial role in biogeochemical cycles, particularly in sulfate reduction processes in anaerobic environments. By participating in these processes, they contribute to the cycling of sulfur and the overall health of their ecosystems. Their ability to thrive without oxygen also makes them essential in environments such as deep-sea sediments, marshes, and other anoxic habitats, where they can influence nutrient dynamics and support other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfobacter
SpeciesDesulfobacter hydrogenophilus
Strainstrain DSM 3380

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1124,

Gene Summary

Adenine Count

1331970 bp

Thymine Count

1314193 bp

Guanine Count

1151751 bp

Cytosine Count

1163871 bp

Genome Length

4962092 bp

Protein-coding Genes

4228 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDO021_00055Not AvailableNegative10149 - 1138748119.7
cold-shock proteinDO021_00060Not AvailableNegative11656 - 118597030.19
hypothetical proteinDO021_00065Not AvailableNegative12121 - 15168113538.0
hypothetical proteinDO021_00070Not AvailableNegative15104 - 1553816379.2
atp-dependent helicase hrpbDO021_00075Not AvailableNegative15535 - 1818396332.4
tautomeraseDO021_00080Not AvailableNegative18240 - 1863515294.1
fad-dependent oxidoreductaseDO021_00085Not AvailablePositive18819 - 2037857474.9
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive20039 - 20466Not Available
glycerol kinaseDO021_00090Not AvailablePositive20421 - 2191454552.5
nadh-dependent alcohol dehydrogenaseDO021_00095Not AvailablePositive22086 - 2324342110.3

Displaying genes 51 – 60 of 4309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.