Agrobacterium sp. MS2

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. MS2 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species possesses a single replicon, indicating a streamlined genetic organization that may facilitate its adaptability in diverse environments. The accession number for this strain is QLNF00000000.1, which serves as a reference for genomic studies and further research. Agrobacterium species are known for their unique ability to transfer DNA to plant cells, a feature that has significant implications in biotechnology and agriculture. This characteristic enhances their ecological role as plant-associated organisms, allowing them to interact with a variety of host plants. Understanding the traits of Agrobacterium sp. MS2, particularly its rod-shaped morphology and motility through flagella, can provide insights into its environmental adaptability and potential applications in phytoremediation or genetic engineering. In summary, the traits of Agrobacterium sp. MS2 highlight its potential ecological interactions and applications in plant biotechnology, emphasizing the importance of studying such microorganisms in the context of agricultural science and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. MS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. MS2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. MS2 NODE_171_length_11438_cov_15.468876, whole

Gene Summary

Adenine Count

1122324 bp

Thymine Count

1117149 bp

Guanine Count

1619310 bp

Cytosine Count

1625005 bp

Genome Length

5484551 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-alpha-acetyl diaminobutyric acid deacetylase doebDOU54_02690Not AvailablePositive561900 - 56291335787.8
ectoine/hydroxyectoine abc transporter substrate-binding protein ehubDOU54_02695Not AvailablePositive562974 - 56382530217.0
ectoine/hydroxyectoine abc transporter permease subunit ehucDOU54_02700Not AvailablePositive563886 - 56455124126.2
ectoine/hydroxyectoine abc transporter permease subunit ehudDOU54_02705Not AvailablePositive564564 - 56525625397.1
ectoine/hydroxyectoine abc transporter atp-binding protein ehuaDOU54_02710Not AvailablePositive565253 - 56603229114.5
laci family transcriptional regulatorDOU54_02715Not AvailableNegative566218 - 56725837942.5
hypothetical proteinDOU54_02720Not AvailableNegative567255 - 5674798158.1
sugar phosphate isomerase/epimeraseDOU54_02725Not AvailablePositive567523 - 56840734031.5
gfo/idh/moca family oxidoreductaseDOU54_02730Not AvailablePositive568489 - 56966143079.4
ap endonucleaseDOU54_02735Not AvailablePositive569844 - 57077334415.9

Displaying genes 631 – 640 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.