Agrobacterium sp. MS2

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. MS2 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species possesses a single replicon, indicating a streamlined genetic organization that may facilitate its adaptability in diverse environments. The accession number for this strain is QLNF00000000.1, which serves as a reference for genomic studies and further research. Agrobacterium species are known for their unique ability to transfer DNA to plant cells, a feature that has significant implications in biotechnology and agriculture. This characteristic enhances their ecological role as plant-associated organisms, allowing them to interact with a variety of host plants. Understanding the traits of Agrobacterium sp. MS2, particularly its rod-shaped morphology and motility through flagella, can provide insights into its environmental adaptability and potential applications in phytoremediation or genetic engineering. In summary, the traits of Agrobacterium sp. MS2 highlight its potential ecological interactions and applications in plant biotechnology, emphasizing the importance of studying such microorganisms in the context of agricultural science and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. MS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. MS2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. MS2 NODE_171_length_11438_cov_15.468876, whole

Gene Summary

Adenine Count

1122324 bp

Thymine Count

1117149 bp

Guanine Count

1619310 bp

Cytosine Count

1625005 bp

Genome Length

5484551 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorDOU54_25845Not AvailablePositive5265226 - 526711268328.9
zinc-binding dehydrogenaseDOU54_25850Not AvailablePositive5267277 - 526835038279.2
nad(p)/fad-dependent oxidoreductaseDOU54_25855Not AvailablePositive5268469 - 527027166966.6
hypothetical proteinDOU54_25860Not AvailablePositive5270367 - 527063310022.0
fad-containing oxidoreductaseDOU54_25865Not AvailableNegative5270694 - 527205548568.5
duf4126 domain-containing proteinDOU54_25870Not AvailableNegative5272052 - 527251315440.5
siderophore-iron reductase fhufDOU54_25875Not AvailableNegative5272823 - 527356327146.7
iron-siderophore abc transporter substrate-binding proteinDOU54_25880Not AvailableNegative5273577 - 527442229528.6
tonb-dependent siderophore receptorDOU54_25885Not AvailableNegative5274446 - 527664179531.2
arac family transcriptional regulatorDOU54_25890Not AvailablePositive5276926 - 527767227837.5

Displaying genes 4951 – 4960 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.