Agrobacterium sp. MS2

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. MS2 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species possesses a single replicon, indicating a streamlined genetic organization that may facilitate its adaptability in diverse environments. The accession number for this strain is QLNF00000000.1, which serves as a reference for genomic studies and further research. Agrobacterium species are known for their unique ability to transfer DNA to plant cells, a feature that has significant implications in biotechnology and agriculture. This characteristic enhances their ecological role as plant-associated organisms, allowing them to interact with a variety of host plants. Understanding the traits of Agrobacterium sp. MS2, particularly its rod-shaped morphology and motility through flagella, can provide insights into its environmental adaptability and potential applications in phytoremediation or genetic engineering. In summary, the traits of Agrobacterium sp. MS2 highlight its potential ecological interactions and applications in plant biotechnology, emphasizing the importance of studying such microorganisms in the context of agricultural science and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. MS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. MS2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. MS2 NODE_171_length_11438_cov_15.468876, whole

Gene Summary

Adenine Count

1122324 bp

Thymine Count

1117149 bp

Guanine Count

1619310 bp

Cytosine Count

1625005 bp

Genome Length

5484551 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDOU54_19045Not AvailableNegative3873781 - 387461729070.6
coa-binding proteinDOU54_19050Not AvailablePositive3875513 - 387594716007.3
o-acetylhomoserine aminocarboxypropyltransferaseDOU54_19055Not AvailablePositive3876021 - 387730445491.9
cupinDOU54_19060Not AvailablePositive3877320 - 387766412909.1
arsr family transcriptional regulatorDOU54_19065Not AvailableNegative3877688 - 387800211430.8
sdr family nad(p)-dependent oxidoreductaseDOU54_19070Not AvailablePositive3878104 - 387886226250.4
cytochrome p450DOU54_19075Not AvailableNegative3878875 - 388012247494.9
ggdef domain-containing proteinDOU54_19080Not AvailableNegative3880201 - 388144845100.3
atp-dependent clp protease proteolytic subunitDOU54_19085Not AvailablePositive3881896 - 388252823284.3
atp-dependent clp protease atp-binding subunit clpxDOU54_19090Not AvailablePositive3882821 - 388409846900.6

Displaying genes 3661 – 3670 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.