Agrobacterium sp. MS2

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. MS2 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species possesses a single replicon, indicating a streamlined genetic organization that may facilitate its adaptability in diverse environments. The accession number for this strain is QLNF00000000.1, which serves as a reference for genomic studies and further research. Agrobacterium species are known for their unique ability to transfer DNA to plant cells, a feature that has significant implications in biotechnology and agriculture. This characteristic enhances their ecological role as plant-associated organisms, allowing them to interact with a variety of host plants. Understanding the traits of Agrobacterium sp. MS2, particularly its rod-shaped morphology and motility through flagella, can provide insights into its environmental adaptability and potential applications in phytoremediation or genetic engineering. In summary, the traits of Agrobacterium sp. MS2 highlight its potential ecological interactions and applications in plant biotechnology, emphasizing the importance of studying such microorganisms in the context of agricultural science and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. MS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. MS2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. MS2 NODE_171_length_11438_cov_15.468876, whole

Gene Summary

Adenine Count

1122324 bp

Thymine Count

1117149 bp

Guanine Count

1619310 bp

Cytosine Count

1625005 bp

Genome Length

5484551 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseDOU54_16375Not AvailablePositive3344454 - 334542235741.5
carbohydrate abc transporter permeaseDOU54_16380Not AvailablePositive3345415 - 334645838930.5
sugar abc transporter atp-binding proteinDOU54_16385Not AvailablePositive3346481 - 334756038788.0
dihydroxy-acid dehydrataseDOU54_16390Not AvailablePositive3347598 - 334932262313.1
nad(p)-dependent oxidoreductaseDOU54_16395Not AvailablePositive3349334 - 335013129392.9
ribonuclease activity regulator rraaDOU54_16400Not AvailablePositive3350166 - 335087625600.7
helix-turn-helix transcriptional regulatorDOU54_16405Not AvailableNegative3350880 - 335312084181.9
abc transporter permeaseDOU54_16410Not AvailablePositive3353367 - 335439537153.6
abc transporter permease subunitDOU54_16415Not AvailablePositive3354395 - 335527632050.8
abc transporter atp-binding proteinDOU54_16420Not AvailablePositive3355281 - 335692759946.3

Displaying genes 3161 – 3170 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.