Agrobacterium sp. MS2

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. MS2 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species possesses a single replicon, indicating a streamlined genetic organization that may facilitate its adaptability in diverse environments. The accession number for this strain is QLNF00000000.1, which serves as a reference for genomic studies and further research. Agrobacterium species are known for their unique ability to transfer DNA to plant cells, a feature that has significant implications in biotechnology and agriculture. This characteristic enhances their ecological role as plant-associated organisms, allowing them to interact with a variety of host plants. Understanding the traits of Agrobacterium sp. MS2, particularly its rod-shaped morphology and motility through flagella, can provide insights into its environmental adaptability and potential applications in phytoremediation or genetic engineering. In summary, the traits of Agrobacterium sp. MS2 highlight its potential ecological interactions and applications in plant biotechnology, emphasizing the importance of studying such microorganisms in the context of agricultural science and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. MS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. MS2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. MS2 NODE_171_length_11438_cov_15.468876, whole

Gene Summary

Adenine Count

1122324 bp

Thymine Count

1117149 bp

Guanine Count

1619310 bp

Cytosine Count

1625005 bp

Genome Length

5484551 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ti-type conjugative transfer system protein tragDOU54_10450Not AvailableNegative2116044 - 211796071101.5
conjugal transfer protein tradDOU54_10455Not AvailableNegative2117957 - 21181908500.3
pilus assembly proteinDOU54_10460Not AvailableNegative2118180 - 211846710267.0
ti-type conjugative transfer relaxase traaDOU54_10465Not AvailablePositive2118689 - 2123308170445.0
hypothetical proteinDOU54_10470Not AvailableNegative2124215 - 212451110956.8
type ii toxin-antitoxin system hipa family toxinDOU54_10475Not AvailableNegative2124620 - 212594247771.9
helix-turn-helix domain-containing proteinDOU54_10480Not AvailableNegative2125932 - 212626412328.0
plasmid partitioning protein repbDOU54_10485Not AvailableNegative2127228 - 21273885868.8
plasmid partitioning protein repaDOU54_10490Not AvailableNegative2127565 - 212875244388.3
p-type conjugative transfer atpase trbbDOU54_10495Not AvailablePositive2129194 - 213015934627.9

Displaying genes 2091 – 2100 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.