Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | LX87_00010 | Not Available | Positive | 10548 - 12362 | 67866.4 |
| hypothetical protein | LX87_00011 | Not Available | Negative | 12400 - 12996 | 22241.0 |
| lvivd repeat-containing protein | LX87_00012 | Not Available | Negative | 13003 - 14298 | 48080.4 |
| heat shock protein hslj | LX87_00013 | Not Available | Negative | 14497 - 14949 | 16157.2 |
| serpin b | LX87_00014 | Not Available | Negative | 14946 - 16187 | 45403.1 |
| hypothetical protein | LX87_00015 | Not Available | Negative | 16341 - 17936 | 58149.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_00016 | Not Available | Negative | 17933 - 18478 | 21108.3 |
| sugar phosphate isomerase/epimerase | LX87_00017 | Not Available | Positive | 18617 - 19495 | 32874.6 |
| putative membrane-bound dehydrogenase-like protein | LX87_00018 | Not Available | Positive | 19607 - 22549 | 108396.0 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | LX87_00019 | Not Available | Negative | 22658 - 24001 | 50321.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
