Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_00980 | Not Available | Positive | 1225654 - 1225794 | 5052.06 |
| heptosyltransferase-2 | LX87_00981 | Not Available | Positive | 1225847 - 1226845 | 37373.2 |
| small conductance mechanosensitive channel | LX87_00982 | Not Available | Positive | 1226901 - 1227779 | 32069.6 |
| yd repeat-containing protein | LX87_00983 | Not Available | Negative | 1227776 - 1228609 | 31298.7 |
| putative zn-dependent protease | LX87_00984 | Not Available | Negative | 1228711 - 1230114 | 54163.2 |
| nucleoside-diphosphate-sugar epimerase | LX87_00985 | Not Available | Negative | 1230294 - 1231325 | 38413.4 |
| methionyl-trna synthetase | LX87_00986 | Not Available | Positive | 1231584 - 1233665 | 78660.1 |
| uncharacterized protein duf4440 | LX87_00987 | Not Available | Negative | 1233732 - 1234166 | 15610.0 |
| alpha-l-fucosidase 2 | LX87_00988 | Not Available | Negative | 1234272 - 1236845 | 95828.5 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LX87_00989 | Not Available | Negative | 1236895 - 1237581 | 24149.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
