Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein with beta-barrel domain | LX87_00889 | Not Available | Positive | 1081304 - 1081885 | 21551.1 |
| calcineurin-like phosphoesterase family protein | LX87_00890 | Not Available | Negative | 1081898 - 1082809 | 34631.2 |
| dna polymerase-3 subunit epsilon | LX87_00891 | Not Available | Positive | 1082925 - 1083455 | 19615.7 |
| d-alanyl-d-alanine dipeptidase | LX87_00892 | Not Available | Negative | 1083482 - 1084147 | 25476.9 |
| spore maturation protein spma | LX87_00893 | Not Available | Positive | 1084309 - 1085544 | 44366.5 |
| hypothetical protein | LX87_00894 | Not Available | Positive | 1085619 - 1085789 | 6825.09 |
| apa family basic amino acid/polyamine antiporter | LX87_00895 | Not Available | Positive | 1085801 - 1087117 | 47379.0 |
| cystathionine beta-lyase | LX87_00896 | Not Available | Positive | 1087211 - 1088371 | 42666.4 |
| beta-glucosidase-like glycosyl hydrolase | LX87_00897 | Not Available | Positive | 1088416 - 1091412 | 111446.0 |
| putative damage-inducible protein dinb | LX87_00898 | Not Available | Positive | 1091474 - 1091926 | 17213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
