Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily b protein | LX87_00859 | Not Available | Negative | 1034607 - 1036379 | 65952.8 |
| cpa2 family monovalent cation:h+ antiporter-2 | LX87_00860 | Not Available | Negative | 1036443 - 1038692 | 82389.3 |
| spore photoproduct lyase family protein | LX87_00861 | Not Available | Negative | 1039045 - 1040076 | 39589.1 |
| thioredoxin | LX87_00862 | Not Available | Negative | 1040255 - 1040950 | 25747.3 |
| pas domain s-box-containing protein | LX87_00863 | Not Available | Negative | 1041123 - 1043852 | 103758.0 |
| amidohydrolase family protein | LX87_00864 | Not Available | Negative | 1044047 - 1045408 | 50414.1 |
| bnr repeat protein | LX87_00865 | Not Available | Positive | 1045898 - 1047160 | 45439.7 |
| short-subunit dehydrogenase | LX87_00866 | Not Available | Negative | 1047232 - 1048083 | 30697.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | LX87_00867 | Not Available | Negative | 1048124 - 1048966 | 30185.8 |
| helix-turn-helix protein | LX87_00868 | Not Available | Negative | 1049049 - 1049951 | 35048.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
