Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_00779 | Not Available | Negative | 935439 - 935798 | 13086.7 |
| isocitrate dehydrogenase (nadp) | LX87_00780 | Not Available | Negative | 935945 - 937165 | 45656.5 |
| 2-amino-3-ketobutyrate coenzyme a ligase | LX87_00781 | Not Available | Negative | 937370 - 938590 | 44314.0 |
| nucleoside-diphosphate-sugar epimerase | LX87_00782 | Not Available | Negative | 938595 - 939557 | 35616.6 |
| dna-binding lrp family transcriptional regulator | LX87_00783 | Not Available | Positive | 939748 - 940212 | 17872.8 |
| putative membrane protein yeih | LX87_00784 | Not Available | Negative | 940206 - 940823 | 22598.2 |
| sialidase-1 | LX87_00785 | Not Available | Positive | 940897 - 942090 | 44607.3 |
| hypothetical protein | LX87_00786 | Not Available | Positive | 942149 - 942889 | 27963.4 |
| putative amidohydrolase | LX87_00787 | Not Available | Negative | 942914 - 943879 | 36191.7 |
| formylglycine-generating enzyme required for sulfatase activity | LX87_00788 | Not Available | Negative | 943952 - 945973 | 74627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
