Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secreted protein | LX87_00709 | Not Available | Positive | 859056 - 860399 | 49996.1 |
| carboxymethylenebutenolidase | LX87_00710 | Not Available | Negative | 860524 - 861381 | 31344.5 |
| superfamily ii dna/rna helicase | LX87_00711 | Not Available | Negative | 861414 - 862622 | 44560.0 |
| cubico group peptidase (beta-lactamase class c family) | LX87_00712 | Not Available | Positive | 862846 - 864003 | 43404.4 |
| cdp-paratose 2-epimerase | LX87_00713 | Not Available | Negative | 864042 - 865103 | 38943.8 |
| kup system potassium uptake protein | LX87_00714 | Not Available | Negative | 865180 - 867123 | 73375.4 |
| manganese transport protein | LX87_00715 | Not Available | Negative | 867307 - 868620 | 47128.9 |
| dtxr family iron (metal) dependent repressor | LX87_00716 | Not Available | Positive | 868856 - 869509 | 24674.5 |
| lipopolysaccharide export system permease protein | LX87_00717 | Not Available | Positive | 869536 - 870612 | 41147.4 |
| eama-like transporter family protein | LX87_00718 | Not Available | Positive | 870744 - 871652 | 33665.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
