Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose dehydrogenase | LX87_00669 | Not Available | Positive | 815350 - 816681 | 48771.9 |
| dtdp-glucose 4,6-dehydratase | LX87_00670 | Not Available | Positive | 816763 - 817740 | 37021.4 |
| gdp-l-fucose synthase | LX87_00671 | Not Available | Positive | 817800 - 818738 | 35133.9 |
| gdpmannose 4,6-dehydratase | LX87_00672 | Not Available | Positive | 818770 - 819882 | 42022.3 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | LX87_00673 | Not Available | Positive | 819917 - 820708 | 29530.9 |
| cytidylate kinase | LX87_00674 | Not Available | Positive | 820720 - 821484 | 28806.5 |
| capsule assembly protein wzi | LX87_00675 | Not Available | Positive | 821516 - 822991 | 54539.9 |
| uncharacterized protein duf115 | LX87_00676 | Not Available | Negative | 823083 - 823886 | 30962.0 |
| oligosaccharide repeat unit polymerase | LX87_00677 | Not Available | Negative | 823943 - 825253 | 49830.3 |
| uncharacterized protein duf115 | LX87_00678 | Not Available | Negative | 825341 - 826174 | 32007.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
