Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_05581 | Not Available | Positive | 6874107 - 6874355 | 9184.73 |
| hypothetical protein | LX87_05582 | Not Available | Negative | 6874816 - 6875139 | 11717.1 |
| transposase is116/is110/is902 family protein | LX87_05583 | Not Available | Negative | 6876223 - 6876741 | 18973.0 |
| transposase | LX87_05584 | Not Available | Negative | 6876977 - 6877249 | 9662.82 |
| putative secreted protein (por secretion system target) | LX87_05585 | Not Available | Positive | 6878259 - 6880307 | 71799.7 |
| putative secreted protein (por secretion system target) | LX87_05586 | Not Available | Positive | 6880806 - 6882740 | 65922.0 |
| pas domain s-box-containing protein | LX87_05587 | Not Available | Negative | 6883142 - 6885370 | 85786.8 |
| response regulator receiver domain-containing protein | LX87_05588 | Not Available | Negative | 6885595 - 6885987 | 14901.2 |
| hypothetical protein | LX87_05589 | Not Available | Negative | 6885984 - 6886154 | 6679.05 |
| conjugative relaxase-like trwc/trai family protein | LX87_05590 | Not Available | Negative | 6886273 - 6887124 | 32123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
