Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | LX87_05400 | Not Available | Negative | 6639705 - 6641372 | 61712.7 |
| tonb-linked susc/raga family outer membrane protein | LX87_05401 | Not Available | Negative | 6641390 - 6644500 | 112284.0 |
| helix-turn-helix protein | LX87_05402 | Not Available | Positive | 6644961 - 6645731 | 29591.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LX87_05403 | Not Available | Positive | 6645854 - 6646768 | 33460.7 |
| collagenase-like protein with putative collagen-binding domain | LX87_05404 | Not Available | Negative | 6646997 - 6649984 | 109717.0 |
| replication initiator protein | LX87_05405 | Not Available | Negative | 6651584 - 6652978 | 54528.0 |
| tonb-linked susc/raga family outer membrane protein | LX87_05406 | Not Available | Positive | 6654227 - 6657394 | 116527.0 |
| putative outer membrane starch-binding protein | LX87_05407 | Not Available | Positive | 6657415 - 6658869 | 54584.6 |
| hypothetical protein | LX87_05408 | Not Available | Negative | 6659070 - 6659690 | 24055.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_05409 | Not Available | Negative | 6659693 - 6660196 | 19310.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
