Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-like camp-binding protein | LX87_05340 | Not Available | Positive | 6558483 - 6559091 | 24121.0 |
| hypothetical protein | LX87_05341 | Not Available | Positive | 6559195 - 6559476 | 10079.8 |
| dna-binding response ompr family regulator | LX87_05342 | Not Available | Positive | 6559585 - 6560259 | 25475.0 |
| signal transduction histidine kinase | LX87_05343 | Not Available | Positive | 6560262 - 6561671 | 52223.8 |
| outer membrane protein tolc | LX87_05344 | Not Available | Positive | 6561736 - 6563157 | 51329.4 |
| multidrug efflux pump subunit acrb | LX87_05345 | Not Available | Positive | 6563168 - 6566428 | 117480.0 |
| rnd family efflux transporter mfp subunit | LX87_05346 | Not Available | Positive | 6566442 - 6567575 | 40563.6 |
| h+/cl- antiporter clca | LX87_05347 | Not Available | Negative | 6567835 - 6569250 | 50315.9 |
| glycogen operon protein | LX87_05348 | Not Available | Positive | 6569964 - 6572078 | 80119.2 |
| l-fuconolactonase | LX87_05349 | Not Available | Positive | 6573064 - 6573999 | 34986.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
