Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LX87_05280 | Not Available | Negative | 6451800 - 6455174 | 125117.0 |
| fecr family protein | LX87_05281 | Not Available | Negative | 6455373 - 6456566 | 44694.5 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_05282 | Not Available | Negative | 6456649 - 6457221 | 22429.0 |
| glycosyl hydrolase family 43 | LX87_05283 | Not Available | Positive | 6457467 - 6458480 | 38407.6 |
| hypothetical protein | LX87_05284 | Not Available | Negative | 6458674 - 6460455 | 68130.0 |
| hypothetical protein | LX87_05285 | Not Available | Negative | 6460511 - 6462247 | 66166.2 |
| putative outer membrane starch-binding protein | LX87_05286 | Not Available | Negative | 6462259 - 6464028 | 66822.2 |
| tonb-linked susc/raga family outer membrane protein | LX87_05287 | Not Available | Negative | 6464041 - 6467157 | 115399.0 |
| putative outer membrane starch-binding protein | LX87_05288 | Not Available | Negative | 6467191 - 6469089 | 72394.5 |
| tonb-linked susc/raga family outer membrane protein | LX87_05289 | Not Available | Negative | 6469099 - 6472596 | 129192.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
