Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_05269 | Not Available | Positive | 6438645 - 6438926 | 10502.1 |
| putative secreted protein (por secretion system target) | LX87_05270 | Not Available | Negative | 6439072 - 6439752 | 23727.1 |
| putative secreted protein (por secretion system target) | LX87_05272 | Not Available | Positive | 6440525 - 6443047 | 88723.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LX87_05273 | Not Available | Positive | 6443483 - 6444505 | 36511.1 |
| putative toxin-antitoxin system antitoxin component (tigr02293 family) | LX87_05274 | Not Available | Positive | 6444707 - 6445132 | 15607.9 |
| res domain-containing protein | LX87_05275 | Not Available | Positive | 6445136 - 6445600 | 17565.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | LX87_05276 | Not Available | Positive | 6445907 - 6446779 | 31559.2 |
| helix-turn-helix protein | LX87_05277 | Not Available | Positive | 6446879 - 6447799 | 35134.7 |
| acetyl xylan esterase axe1 | LX87_05278 | Not Available | Negative | 6448008 - 6450158 | 79296.8 |
| putative outer membrane starch-binding protein | LX87_05279 | Not Available | Negative | 6450172 - 6451791 | 62011.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
