Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding domain-containing protein | LX87_05068 | Not Available | Negative | 6200793 - 6204041 | 121947.0 |
| methylmalonyl-coa mutase | LX87_05069 | Not Available | Positive | 6204126 - 6207533 | 126614.0 |
| hypothetical protein | LX87_05070 | Not Available | Positive | 6207575 - 6208096 | 20986.4 |
| hypothetical protein | LX87_05071 | Not Available | Positive | 6208393 - 6211083 | 104711.0 |
| tfp pilus assembly protein pilf | LX87_05072 | Not Available | Positive | 6211311 - 6213461 | 81064.9 |
| putative membrane protein ypha (doxx/surf4 family) | LX87_05073 | Not Available | Positive | 6213565 - 6213999 | 16066.2 |
| helix-turn-helix protein | LX87_05074 | Not Available | Negative | 6214006 - 6214935 | 35783.4 |
| aldehyde dehydrogenase | LX87_05075 | Not Available | Positive | 6215132 - 6216670 | 56533.0 |
| hypothetical protein | LX87_05076 | Not Available | Positive | 6216782 - 6217168 | 14485.3 |
| cell division transport system permease protein | LX87_05077 | Not Available | Positive | 6217453 - 6218328 | 32971.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
