Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | LX87_05058 | Not Available | Positive | 6191728 - 6192339 | 23068.7 |
| peptidase m23-like protein | LX87_05059 | Not Available | Positive | 6192364 - 6194355 | 74144.8 |
| peroxiredoxin q/bcp | LX87_05060 | Not Available | Positive | 6194421 - 6194870 | 17144.3 |
| transketolase | LX87_05061 | Not Available | Positive | 6194947 - 6195804 | 31315.4 |
| putative atpase | LX87_05062 | Not Available | Positive | 6195807 - 6196826 | 38899.5 |
| transketolase | LX87_05063 | Not Available | Positive | 6197380 - 6198336 | 34244.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_05064 | Not Available | Positive | 6198428 - 6198988 | 22070.3 |
| hypothetical protein | LX87_05065 | Not Available | Positive | 6199033 - 6199482 | 16917.8 |
| hypothetical protein | LX87_05066 | Not Available | Positive | 6199594 - 6200004 | 15904.3 |
| hd domain-containing protein | LX87_05067 | Not Available | Positive | 6200219 - 6200812 | 22664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
