Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| late embryogenesis abundant protein | LX87_04978 | Not Available | Positive | 6095530 - 6096432 | 33756.3 |
| beta-aspartyl-peptidase (threonine type) | LX87_04979 | Not Available | Positive | 6096442 - 6097362 | 32774.4 |
| cyanophycinase | LX87_04980 | Not Available | Negative | 6097366 - 6098205 | 30974.5 |
| cyanophycin synthetase | LX87_04981 | Not Available | Negative | 6098407 - 6101076 | 97519.3 |
| sana protein | LX87_04982 | Not Available | Negative | 6101561 - 6102268 | 26709.5 |
| topoisomerase-4 subunit a | LX87_04983 | Not Available | Negative | 6102270 - 6104930 | 100463.0 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | LX87_04984 | Not Available | Negative | 6105373 - 6106011 | 23770.1 |
| hypothetical protein | LX87_04985 | Not Available | Negative | 6106004 - 6107587 | 57855.4 |
| alpha-l-fucosidase | LX87_04986 | Not Available | Positive | 6107819 - 6109900 | 77500.5 |
| glutaryl-coa dehydrogenase | LX87_04987 | Not Available | Positive | 6109979 - 6111160 | 43274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
