Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | LX87_04968 | Not Available | Negative | 6076588 - 6077919 | 50000.3 |
| hypothetical protein | LX87_04969 | Not Available | Negative | 6078124 - 6078477 | 12737.8 |
| tonb-linked susc/raga family outer membrane protein | LX87_04970 | Not Available | Positive | 6079194 - 6082184 | 108139.0 |
| susd-like starch-binding protein associating with outer membrane | LX87_04971 | Not Available | Positive | 6082201 - 6083679 | 53968.8 |
| tonb-linked susc/raga family outer membrane protein | LX87_04972 | Not Available | Positive | 6084055 - 6087213 | 114476.0 |
| putative outer membrane starch-binding protein | LX87_04973 | Not Available | Positive | 6087232 - 6088755 | 57523.4 |
| gh43 family beta-xylosidase | LX87_04974 | Not Available | Positive | 6088820 - 6089875 | 38436.1 |
| beta-xylosidase | LX87_04975 | Not Available | Positive | 6089891 - 6091399 | 55403.3 |
| emrb/qaca subfamily drug resistance transporter | LX87_04976 | Not Available | Positive | 6091676 - 6093097 | 50042.9 |
| putative secreted protein (por secretion system target) | LX87_04977 | Not Available | Positive | 6093252 - 6095348 | 73317.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
