Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_04958 | Not Available | Negative | 6061287 - 6061814 | 20362.3 |
| hypothetical protein | LX87_04959 | Not Available | Negative | 6062102 - 6063649 | 55985.2 |
| hypothetical protein | LX87_04960 | Not Available | Negative | 6063867 - 6065129 | 45306.6 |
| prolyl-trna synthetase | LX87_04961 | Not Available | Positive | 6065321 - 6066793 | 56024.6 |
| peptidylprolyl isomerase | LX87_04962 | Not Available | Positive | 6066930 - 6067382 | 16086.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | LX87_04963 | Not Available | Negative | 6067556 - 6067939 | 13501.2 |
| carboxypeptidase-like protein | LX87_04964 | Not Available | Negative | 6068059 - 6070587 | 95035.2 |
| putative metal-dependent hd superfamily phosphohydrolase | LX87_04965 | Not Available | Positive | 6070823 - 6072025 | 45659.3 |
| uncharacterized protein yjik | LX87_04966 | Not Available | Positive | 6072091 - 6072936 | 31220.6 |
| calcineurin-like phosphoesterase family protein | LX87_04967 | Not Available | Positive | 6072954 - 6076586 | 137081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
