Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule assembly protein wzi | LX87_04948 | Not Available | Positive | 6049341 - 6050882 | 57428.4 |
| hypothetical protein | LX87_04949 | Not Available | Negative | 6050883 - 6051167 | 10945.0 |
| uncharacterized protein (tigr00159 family) | LX87_04950 | Not Available | Negative | 6051346 - 6052176 | 30641.6 |
| dihydropteroate synthase | LX87_04951 | Not Available | Negative | 6052206 - 6053054 | 30538.9 |
| uncharacterized protein duf1599 | LX87_04952 | Not Available | Positive | 6053158 - 6053715 | 21448.0 |
| putative membrane protein ypha (doxx/surf4 family) | LX87_04953 | Not Available | Positive | 6053712 - 6054860 | 43178.2 |
| shikimate kinase | LX87_04954 | Not Available | Positive | 6054909 - 6055400 | 18792.3 |
| outer membrane protein tolc | LX87_04955 | Not Available | Positive | 6055521 - 6056864 | 51193.1 |
| membrane fusion protein (multidrug efflux system) | LX87_04956 | Not Available | Positive | 6056904 - 6058073 | 41625.6 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LX87_04957 | Not Available | Positive | 6058086 - 6061286 | 116693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
