Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_04938 | Not Available | Positive | 6040909 - 6041340 | 15465.4 |
| dna repair protein radc | LX87_04939 | Not Available | Negative | 6041402 - 6042097 | 25572.9 |
| small subunit ribosomal protein s20 | LX87_04940 | Not Available | Negative | 6042259 - 6042504 | 9180.43 |
| stress responsive alpha/beta barrel protein | LX87_04941 | Not Available | Negative | 6042624 - 6043025 | 15424.5 |
| hypothetical protein | LX87_04942 | Not Available | Positive | 6043115 - 6044119 | 38936.1 |
| 23s rrna (cytosine1962-c5)-methyltransferase | LX87_04943 | Not Available | Positive | 6044168 - 6045355 | 44056.4 |
| vcbs repeat protein | LX87_04944 | Not Available | Positive | 6045386 - 6046519 | 42014.2 |
| s1-c subfamily serine protease | LX87_04945 | Not Available | Negative | 6046593 - 6047615 | 35821.9 |
| hypothetical protein | LX87_04946 | Not Available | Positive | 6047746 - 6047922 | 7157.49 |
| udp-galactopyranose mutase | LX87_04947 | Not Available | Positive | 6048006 - 6049148 | 43838.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
