Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | LX87_04878 | Not Available | Positive | 5970279 - 5971514 | 45127.8 |
| 2-dehydro-3-deoxygalactonokinase | LX87_04879 | Not Available | Positive | 5971624 - 5972646 | 37815.1 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | LX87_04880 | Not Available | Positive | 5972615 - 5973277 | 23926.3 |
| acs family hexuronate transporter-like mfs transporter | LX87_04881 | Not Available | Positive | 5973318 - 5974619 | 48191.5 |
| arylsulfatase | LX87_04882 | Not Available | Positive | 5974785 - 5976242 | 53348.9 |
| snoal-like protein | LX87_04883 | Not Available | Negative | 5976335 - 5976802 | 17968.5 |
| hypothetical protein | LX87_04884 | Not Available | Negative | 5976964 - 5978721 | 65755.7 |
| hypothetical protein | LX87_04885 | Not Available | Positive | 5978866 - 5979135 | 9963.77 |
| alanyl-trna synthetase | LX87_04886 | Not Available | Negative | 5979214 - 5981868 | 98621.3 |
| dna-binding transcriptional merr regulator | LX87_04887 | Not Available | Positive | 5981974 - 5982303 | 13210.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
