Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf3892 | LX87_04778 | Not Available | Negative | 5850576 - 5850851 | 10356.3 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LX87_04779 | Not Available | Negative | 5851121 - 5851405 | 10362.3 |
| pas domain s-box-containing protein | LX87_04780 | Not Available | Negative | 5851706 - 5853250 | 57009.7 |
| signal transduction histidine kinase | LX87_04781 | Not Available | Positive | 5853729 - 5857739 | 151751.0 |
| d-alanyl-d-alanine carboxypeptidase | LX87_04782 | Not Available | Positive | 5857905 - 5859230 | 48308.9 |
| d-alanyl-d-alanine carboxypeptidase | LX87_04783 | Not Available | Positive | 5859303 - 5860523 | 45059.6 |
| d-alanyl-d-alanine carboxypeptidase | LX87_04784 | Not Available | Positive | 5860565 - 5861872 | 48212.3 |
| hypothetical protein | LX87_04785 | Not Available | Negative | 5862263 - 5862385 | 4746.57 |
| putative transposase | LX87_04786 | Not Available | Positive | 5862515 - 5862812 | 11741.0 |
| hypothetical protein | LX87_04787 | Not Available | Negative | 5862778 - 5864112 | 49153.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
