Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lmbe family n-acetylglucosaminyl deacetylase | LX87_04738 | Not Available | Negative | 5792524 - 5793246 | 26921.4 |
| regulator of rnase e activity rraa | LX87_04739 | Not Available | Negative | 5793246 - 5793926 | 25613.8 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | LX87_04740 | Not Available | Negative | 5793940 - 5795091 | 42444.9 |
| l-iditol 2-dehydrogenase/l-idonate 5-dehydrogenase | LX87_04741 | Not Available | Negative | 5795097 - 5796104 | 36205.1 |
| hypothetical protein | LX87_04742 | Not Available | Negative | 5796101 - 5796967 | 32225.7 |
| glycosyl hydrolase family 39 | LX87_04743 | Not Available | Negative | 5797007 - 5798389 | 52874.7 |
| hypothetical protein | LX87_04744 | Not Available | Negative | 5798434 - 5801271 | 106006.0 |
| putative outer membrane starch-binding protein | LX87_04745 | Not Available | Negative | 5801311 - 5802945 | 60292.6 |
| tonb-linked susc/raga family outer membrane protein | LX87_04746 | Not Available | Negative | 5802957 - 5806118 | 114992.0 |
| abc-type multidrug transport system atpase subunit | LX87_04747 | Not Available | Positive | 5807034 - 5807939 | 33230.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
