Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | LX87_04658 | Not Available | Negative | 5688387 - 5689406 | 38952.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_04659 | Not Available | Negative | 5689459 - 5690118 | 25685.9 |
| hypothetical protein | LX87_04660 | Not Available | Positive | 5690215 - 5690343 | 4725.63 |
| hypothetical protein | LX87_04661 | Not Available | Negative | 5690430 - 5691008 | 20907.6 |
| tonb-linked susc/raga family outer membrane protein | LX87_04662 | Not Available | Positive | 5692200 - 5695730 | 127433.0 |
| putative outer membrane starch-binding protein | LX87_04663 | Not Available | Positive | 5695742 - 5697361 | 59082.2 |
| hypothetical protein | LX87_04664 | Not Available | Negative | 5697526 - 5700228 | 102318.0 |
| polygalacturonase | LX87_04665 | Not Available | Negative | 5700301 - 5701767 | 53996.6 |
| alpha-l-rhamnosidase | LX87_04666 | Not Available | Positive | 5702059 - 5705343 | 122529.0 |
| dihydroanticapsin dehydrogenase | LX87_04667 | Not Available | Positive | 5705435 - 5706181 | 26642.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
