Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like putative cysteine protease | LX87_04638 | Not Available | Positive | 5652006 - 5654630 | 100107.0 |
| putative secreted protein (por secretion system target) | LX87_04639 | Not Available | Positive | 5655605 - 5659444 | 136283.0 |
| uncharacterized protein (duf1810 family) | LX87_04640 | Not Available | Positive | 5660097 - 5660528 | 16314.5 |
| exodeoxyribonuclease-3 | LX87_04641 | Not Available | Positive | 5660587 - 5661363 | 29297.9 |
| hxlr family transcriptional regulator | LX87_04642 | Not Available | Positive | 5662591 - 5662956 | 13876.3 |
| linoleoyl-coa desaturase | LX87_04643 | Not Available | Positive | 5662946 - 5664037 | 41475.1 |
| hypothetical protein | LX87_04644 | Not Available | Positive | 5664140 - 5664421 | 10747.8 |
| cold shock cspa family protein | LX87_04645 | Not Available | Positive | 5664503 - 5664958 | 17024.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_04646 | Not Available | Positive | 5665765 - 5666409 | 25377.3 |
| fecr family protein | LX87_04647 | Not Available | Positive | 5666544 - 5667653 | 42301.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
