Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_04608 | Not Available | Negative | 5617708 - 5618499 | 29676.4 |
| rna polymerase sigma factor (sigma-70 family) | LX87_04609 | Not Available | Negative | 5618496 - 5619083 | 22939.6 |
| hypothetical protein | LX87_04610 | Not Available | Positive | 5619307 - 5620623 | 50231.8 |
| hypothetical protein | LX87_04611 | Not Available | Positive | 5620678 - 5621802 | 41876.4 |
| hypothetical protein | LX87_04612 | Not Available | Positive | 5622068 - 5622598 | 20391.5 |
| uncharacterized protein duf2490 | LX87_04613 | Not Available | Positive | 5622599 - 5623282 | 26169.8 |
| dna-binding marr family transcriptional regulator | LX87_04614 | Not Available | Positive | 5623445 - 5624098 | 25066.2 |
| outer membrane receptor protein involved in fe transport | LX87_04615 | Not Available | Positive | 5624161 - 5626617 | 91086.8 |
| dna-binding fadr family transcriptional regulator | LX87_04616 | Not Available | Negative | 5627055 - 5627750 | 26485.2 |
| tonb-linked susc/raga family outer membrane protein | LX87_04617 | Not Available | Positive | 5627950 - 5631144 | 116934.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
