Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | LX87_04548 | Not Available | Negative | 5543475 - 5544305 | 30672.9 |
| neutral/alkaline ceramidase-like enzyme | LX87_04549 | Not Available | Negative | 5544317 - 5545645 | 48602.7 |
| putative membrane-bound dehydrogenase-like protein | LX87_04550 | Not Available | Negative | 5545661 - 5548708 | 111577.0 |
| putative outer membrane starch-binding protein | LX87_04551 | Not Available | Negative | 5548719 - 5550365 | 61313.4 |
| tonb-linked susc/raga family outer membrane protein | LX87_04552 | Not Available | Negative | 5550385 - 5553840 | 126663.0 |
| fecr family protein | LX87_04553 | Not Available | Negative | 5553860 - 5554858 | 38346.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_04554 | Not Available | Negative | 5554928 - 5555602 | 26120.1 |
| phospho-acceptor domain-containing protein | LX87_04555 | Not Available | Negative | 5555893 - 5557485 | 59135.6 |
| chey-like chemotaxis protein | LX87_04556 | Not Available | Positive | 5557774 - 5558256 | 18505.3 |
| fkbp-type peptidyl-prolyl isomerase-like protein | LX87_04557 | Not Available | Negative | 5558383 - 5559279 | 32927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
