Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar lactone lactonase yvre | LX87_00409 | Not Available | Positive | 498052 - 498906 | 30977.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_00410 | Not Available | Positive | 499105 - 499686 | 22770.5 |
| fecr family protein | LX87_00411 | Not Available | Positive | 499771 - 500961 | 44174.5 |
| tonb-linked susc/raga family outer membrane protein | LX87_00412 | Not Available | Positive | 501158 - 504700 | 128225.0 |
| putative outer membrane starch-binding protein | LX87_00413 | Not Available | Positive | 504726 - 506168 | 52713.4 |
| zinc carboxypeptidase | LX87_00414 | Not Available | Positive | 506273 - 507538 | 47632.2 |
| glucose/arabinose dehydrogenase | LX87_00415 | Not Available | Positive | 507543 - 509063 | 56138.6 |
| glycosyl hydrolase family 2 | LX87_00416 | Not Available | Positive | 509275 - 512160 | 108164.0 |
| tfp pilus assembly protein pilf | LX87_00417 | Not Available | Positive | 512191 - 515556 | 128687.0 |
| arac-like dna-binding protein | LX87_00418 | Not Available | Negative | 515553 - 516449 | 34292.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
