Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | LX87_00379 | Not Available | Positive | 454963 - 455307 | 12718.2 |
| sugar phosphate permease | LX87_00380 | Not Available | Positive | 455369 - 456610 | 46319.7 |
| peroxiredoxin | LX87_00381 | Not Available | Negative | 456607 - 457743 | 42453.9 |
| histidine kinase | LX87_00382 | Not Available | Positive | 457929 - 459026 | 42438.8 |
| hypothetical protein | LX87_00383 | Not Available | Positive | 459113 - 459784 | 24939.9 |
| hypothetical protein | LX87_00384 | Not Available | Positive | 459874 - 460401 | 19097.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_00385 | Not Available | Positive | 460472 - 461047 | 22573.9 |
| outer membrane protein with beta-barrel domain | LX87_00386 | Not Available | Positive | 461028 - 462386 | 50865.9 |
| putative membrane-bound dehydrogenase-like protein | LX87_00387 | Not Available | Positive | 462630 - 466157 | 130398.0 |
| vcbs repeat protein | LX87_00388 | Not Available | Positive | 466207 - 467424 | 45480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
