Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | LX87_00020 | Not Available | Positive | 24332 - 25822 | 57456.0 |
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | LX87_00021 | Not Available | Negative | 26021 - 26542 | 19590.6 |
| outer membrane protein ompa-like peptidoglycan-associated protein | LX87_00022 | Not Available | Positive | 26731 - 27816 | 41055.1 |
| quinoprotein glucose dehydrogenase | LX87_00023 | Not Available | Positive | 28182 - 30413 | 81564.6 |
| valyl-trna synthetase | LX87_00024 | Not Available | Negative | 30483 - 33146 | 101894.0 |
| uncharacterized protein yece (duf72 family) | LX87_00025 | Not Available | Positive | 33349 - 34275 | 35418.2 |
| glutamine amidotransferase | LX87_00026 | Not Available | Positive | 34446 - 35045 | 22153.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | LX87_00027 | Not Available | Positive | 35122 - 35841 | 26625.0 |
| cyclase | LX87_00028 | Not Available | Positive | 35944 - 36705 | 26939.3 |
| uncharacterized protein duf3467 | LX87_00029 | Not Available | Positive | 36807 - 37127 | 11847.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
