Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | LX87_00240 | Not Available | Positive | 279614 - 281017 | 50662.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | LX87_00241 | Not Available | Positive | 281031 - 281630 | 22399.4 |
| 3-isopropylmalate dehydrogenase | LX87_00242 | Not Available | Positive | 281723 - 282793 | 38737.5 |
| 2-isopropylmalate synthase | LX87_00243 | Not Available | Positive | 282834 - 283973 | 41821.1 |
| ribosomal protein l11 methyltransferase | LX87_00244 | Not Available | Positive | 284072 - 284929 | 31648.1 |
| hypothetical protein | LX87_00245 | Not Available | Positive | 285002 - 289792 | 175118.0 |
| uracil phosphoribosyltransferase | LX87_00246 | Not Available | Negative | 289793 - 290437 | 24034.2 |
| hypothetical protein | LX87_00247 | Not Available | Positive | 290567 - 292369 | 68623.5 |
| d-sedoheptulose 7-phosphate isomerase | LX87_00248 | Not Available | Positive | 292396 - 292977 | 21029.3 |
| o-methyltransferase | LX87_00249 | Not Available | Negative | 293049 - 294107 | 39308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
