Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | LX87_00160 | Not Available | Positive | 180553 - 181389 | 32166.0 |
| thiol:disulfide interchange protein dsbd | LX87_00161 | Not Available | Positive | 181576 - 183741 | 78816.0 |
| hypothetical protein | LX87_00162 | Not Available | Positive | 183846 - 184766 | 33720.8 |
| flaa1/epsc-like ndp-sugar epimerase | LX87_00163 | Not Available | Positive | 184876 - 186822 | 73165.4 |
| acetyl-coa c-acetyltransferase | LX87_00164 | Not Available | Positive | 186964 - 188172 | 42635.6 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase/3-hydroxybutyryl-coa epimerase | LX87_00165 | Not Available | Positive | 188183 - 190342 | 78124.5 |
| peptidase m28-like protein | LX87_00166 | Not Available | Positive | 190365 - 191867 | 53822.0 |
| outer membrane protein with beta-barrel domain | LX87_00167 | Not Available | Negative | 191933 - 192592 | 24194.8 |
| tonb family protein | LX87_00168 | Not Available | Negative | 192777 - 194003 | 44803.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_00169 | Not Available | Negative | 193996 - 194655 | 25909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
