Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd-like starch-binding protein associating with outer membrane | LX87_01200 | Not Available | Positive | 1516306 - 1517988 | 63760.8 |
| lyttr family two component transcriptional regulator | LX87_01201 | Not Available | Negative | 1518034 - 1518810 | 30181.2 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LX87_01202 | Not Available | Negative | 1518782 - 1519987 | 46504.6 |
| carboxypeptidase family protein | LX87_01203 | Not Available | Positive | 1520536 - 1521375 | 30450.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_01204 | Not Available | Positive | 1521597 - 1522151 | 21814.9 |
| fecr family protein | LX87_01205 | Not Available | Positive | 1522163 - 1523173 | 37538.8 |
| tonb-linked susc/raga family outer membrane protein | LX87_01206 | Not Available | Positive | 1523197 - 1526526 | 123390.0 |
| putative outer membrane starch-binding protein | LX87_01207 | Not Available | Positive | 1526552 - 1528165 | 60120.0 |
| hypothetical protein | LX87_01208 | Not Available | Positive | 1528263 - 1529342 | 41008.6 |
| hypothetical protein | LX87_01209 | Not Available | Positive | 1529376 - 1530977 | 61531.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
