Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | strain DSM 21851 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LX87_01000 | Not Available | Positive | 1253145 - 1253420 | 10340.6 |
| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase | LX87_01001 | Not Available | Negative | 1253427 - 1253966 | 20829.4 |
| pth1 family peptidyl-trna hydrolase | LX87_01002 | Not Available | Positive | 1254084 - 1254644 | 20912.4 |
| outer membrane receptor protein involved in fe transport | LX87_01003 | Not Available | Positive | 1255279 - 1257537 | 84526.8 |
| padr family transcriptional regulator | LX87_01004 | Not Available | Positive | 1258747 - 1259085 | 12475.1 |
| putative abc transport system permease protein | LX87_01005 | Not Available | Positive | 1259082 - 1261820 | 102894.0 |
| histidine kinase | LX87_01006 | Not Available | Positive | 1262142 - 1263758 | 61700.5 |
| lyttr family two component transcriptional regulator | LX87_01007 | Not Available | Positive | 1263749 - 1264501 | 28956.2 |
| pas domain s-box-containing protein | LX87_01008 | Not Available | Negative | 1264841 - 1268002 | 118837.0 |
| putative secreted protein (por secretion system target) | LX87_01009 | Not Available | Negative | 1268823 - 1269272 | 16181.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
