Sphingomonas sp. S-NIH.Pt3_0716

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S-NIH.Pt3_0716 is a rod-shaped bacterium that exhibits flagella presence, indicating motility. The organism is characterized by a singular replicon, which is crucial for its replication and genetic stability. The genomic data for this strain can be referenced under the accession number QLJK00000000.1. Sphingomonas species are known for their diverse metabolic capabilities and their ability to thrive in various environments, including soil and aquatic systems. The presence of flagella in Sphingomonas sp. S-NIH.Pt3_0716 suggests that it may play a role in the dynamics of microbial communities, particularly in nutrient cycling and degradation processes. These bacteria are often associated with bioremediation, where they can degrade pollutants and organic compounds, highlighting their potential ecological significance. The unique traits of Sphingomonas sp. S-NIH.Pt3_0716, particularly its motility and genomic characteristics, may contribute to its adaptability in various habitats, allowing it to exploit different ecological niches. Understanding the functional roles of such microorganisms can provide insights into their contributions to ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. S-NIH.Pt3_0716
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S-NIH.Pt3_0716
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S-NIH.Pt3_0716 NODE_172, whole genome shotgun

Gene Summary

Adenine Count

972055 bp

Thymine Count

973059 bp

Guanine Count

1766949 bp

Cytosine Count

1747969 bp

Genome Length

5460032 bp

Protein-coding Genes

4933 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esteraseBRX37_22905Not AvailablePositive4782131 - 478314736023.9
serine hydrolaseBRX37_22910Not AvailableNegative4783144 - 478426839847.3
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseBRX37_22915Not AvailablePositive4784456 - 478591051255.4
penicillin acylase family proteinBRX37_22920Not AvailableNegative4785914 - 478829587477.8
tonb-dependent receptorBRX37_22925Not AvailablePositive4788755 - 479157799919.9
d-aminoacylaseBRX37_22930Not AvailableNegative4791817 - 479344857524.9
lysr family transcriptional regulatorBRX37_22935Not AvailablePositive4793615 - 479449932488.3
duf1611 domain-containing proteinBRX37_22940Not AvailablePositive4794594 - 479563136496.9
dipeptide epimeraseBRX37_22945Not AvailablePositive4795637 - 479662934400.4
dicarboxylate/amino acid:cation symporterBRX37_22950Not AvailablePositive4796646 - 479787842862.0

Displaying genes 4531 – 4540 of 5145 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.