Sphingomonas sp. S-NIH.Pt3_0716

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S-NIH.Pt3_0716 is a rod-shaped bacterium that exhibits flagella presence, indicating motility. The organism is characterized by a singular replicon, which is crucial for its replication and genetic stability. The genomic data for this strain can be referenced under the accession number QLJK00000000.1. Sphingomonas species are known for their diverse metabolic capabilities and their ability to thrive in various environments, including soil and aquatic systems. The presence of flagella in Sphingomonas sp. S-NIH.Pt3_0716 suggests that it may play a role in the dynamics of microbial communities, particularly in nutrient cycling and degradation processes. These bacteria are often associated with bioremediation, where they can degrade pollutants and organic compounds, highlighting their potential ecological significance. The unique traits of Sphingomonas sp. S-NIH.Pt3_0716, particularly its motility and genomic characteristics, may contribute to its adaptability in various habitats, allowing it to exploit different ecological niches. Understanding the functional roles of such microorganisms can provide insights into their contributions to ecosystem health and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. S-NIH.Pt3_0716
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S-NIH.Pt3_0716
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S-NIH.Pt3_0716 NODE_172, whole genome shotgun

Gene Summary

Adenine Count

972055 bp

Thymine Count

973059 bp

Guanine Count

1766949 bp

Cytosine Count

1747969 bp

Genome Length

5460032 bp

Protein-coding Genes

4933 genes

Non-Coding Genes

212 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinBRX37_06365Not AvailableNegative1368051 - 136983864303.8
uracil-dna glycosylaseBRX37_06370Not AvailableNegative1369835 - 137061428057.0
electron transfer flavoprotein-ubiquinone oxidoreductaseBRX37_06375Not AvailablePositive1370696 - 137234860568.4
hypothetical proteinBRX37_06380Not AvailablePositive1372374 - 137399056649.4
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseBRX37_06385Not AvailablePositive1374014 - 137486830113.0
n-formylglutamate amidohydrolaseBRX37_06390Not AvailablePositive1374865 - 137558125986.2
hypothetical proteinBRX37_06395Not AvailablePositive1375634 - 137599012247.8
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseBRX37_06400Not AvailablePositive1375990 - 137738147204.1
class i sam-dependent rna methyltransferaseBRX37_06405Not AvailablePositive1377378 - 137858342595.4
type iii plp-dependent enzymeBRX37_06410Not AvailableNegative1378747 - 137994043278.5

Displaying genes 1461 – 1470 of 5145 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.