Rhodobacteraceae bacterium AsT-22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

The Rhodobacteraceae bacterium AsT-22 is a member of the family Rhodobacteraceae, which is known for its diverse metabolic capabilities and ecological roles. This bacterium is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic data for Rhodobacteraceae bacterium AsT-22 is accessible under the accession number QLIW00000000.1. This accession points to the organism's genomic sequence, which can provide insights into its genetic structure and potential functions. The presence of only one replicon may suggest a simpler regulatory mechanism compared to bacteria with multiple replicons, potentially allowing for efficient replication and robustness in fluctuating conditions. Rhodobacteraceae members are often found in aquatic environments, where they play crucial roles in biogeochemical cycles, particularly in the processing of organic matter and nutrient cycling. The characteristics of Rhodobacteraceae bacterium AsT-22 may contribute to its ecological niche, potentially impacting local microbial communities and influencing nutrient dynamics in its habitat. Overall, the study of Rhodobacteraceae bacterium AsT-22 offers insights into the diversity and functional potential of bacteria within the Rhodobacteraceae family, highlighting their importance in ecological systems. Understanding its genomic features can help elucidate its role in environmental processes and microbial interactions.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium AsT-22 2-AsT-22_37, whole genome

Gene Summary

Adenine Count

805792 bp

Thymine Count

814453 bp

Guanine Count

1417563 bp

Cytosine Count

1360773 bp

Genome Length

4398588 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homogentisate 1,2-dioxygenaseDOO74_00165Not AvailableNegative39081 - 4043650299.5
marr family transcriptional regulatorDOO74_00170Not AvailablePositive40507 - 4094717000.6
eama/rhat family transporterDOO74_00175Not AvailablePositive40944 - 4180429530.2
duf2938 domain-containing proteinDOO74_00180Not AvailableNegative41880 - 4236817376.9
merr family transcriptional regulatorDOO74_00185Not AvailablePositive42533 - 4293115017.4
atpaseDOO74_00190Not AvailableNegative43237 - 4404630031.4
c4-dicarboxylate abc transporter substrate-binding proteinDOO74_00195Not AvailablePositive44242 - 4525536968.6
trap transporter small permeaseDOO74_00200Not AvailablePositive45333 - 4598924034.9
trap transporter large permeaseDOO74_00205Not AvailablePositive45976 - 4737649325.2
nad(p)/fad-dependent oxidoreductaseDOO74_00210Not AvailablePositive47412 - 4872848981.2

Displaying genes 51 – 60 of 4200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.