Rhodobacteraceae bacterium AsT-22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

The Rhodobacteraceae bacterium AsT-22 is a member of the family Rhodobacteraceae, which is known for its diverse metabolic capabilities and ecological roles. This bacterium is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic data for Rhodobacteraceae bacterium AsT-22 is accessible under the accession number QLIW00000000.1. This accession points to the organism's genomic sequence, which can provide insights into its genetic structure and potential functions. The presence of only one replicon may suggest a simpler regulatory mechanism compared to bacteria with multiple replicons, potentially allowing for efficient replication and robustness in fluctuating conditions. Rhodobacteraceae members are often found in aquatic environments, where they play crucial roles in biogeochemical cycles, particularly in the processing of organic matter and nutrient cycling. The characteristics of Rhodobacteraceae bacterium AsT-22 may contribute to its ecological niche, potentially impacting local microbial communities and influencing nutrient dynamics in its habitat. Overall, the study of Rhodobacteraceae bacterium AsT-22 offers insights into the diversity and functional potential of bacteria within the Rhodobacteraceae family, highlighting their importance in ecological systems. Understanding its genomic features can help elucidate its role in environmental processes and microbial interactions.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium AsT-22 2-AsT-22_37, whole genome

Gene Summary

Adenine Count

805792 bp

Thymine Count

814453 bp

Guanine Count

1417563 bp

Cytosine Count

1360773 bp

Genome Length

4398588 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseDOO74_20640Not AvailablePositive4220472 - 422122726383.9
acyl-coa dehydrogenaseDOO74_20645Not AvailablePositive4221313 - 422258747438.2
short-chain dehydrogenaseDOO74_20650Not AvailablePositive4222667 - 422344627698.2
long-chain fatty acid--coa ligaseDOO74_20655Not AvailableNegative4223457 - 422515462004.4
hypothetical proteinDOO74_20660Not AvailablePositive4225585 - 422677843736.6
c4-dicarboxylate abc transporter permeaseDOO74_20665Not AvailablePositive4226877 - 422881168603.5
nadph:quinone oxidoreductase family proteinDOO74_20670Not AvailableNegative4228853 - 422984835101.3
abc transporter substrate-binding proteinDOO74_20675Not AvailablePositive4230278 - 423132137621.9
abc transporter substrate-binding proteinDOO74_20680Not AvailablePositive4231412 - 423197820743.8
trap transporter permease dctm/qDOO74_20685Not AvailablePositive4231975 - 423328846977.9

Displaying genes 4041 – 4050 of 4200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.