Rhodobacteraceae bacterium AsT-22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

The Rhodobacteraceae bacterium AsT-22 is a member of the family Rhodobacteraceae, which is known for its diverse metabolic capabilities and ecological roles. This bacterium is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic data for Rhodobacteraceae bacterium AsT-22 is accessible under the accession number QLIW00000000.1. This accession points to the organism's genomic sequence, which can provide insights into its genetic structure and potential functions. The presence of only one replicon may suggest a simpler regulatory mechanism compared to bacteria with multiple replicons, potentially allowing for efficient replication and robustness in fluctuating conditions. Rhodobacteraceae members are often found in aquatic environments, where they play crucial roles in biogeochemical cycles, particularly in the processing of organic matter and nutrient cycling. The characteristics of Rhodobacteraceae bacterium AsT-22 may contribute to its ecological niche, potentially impacting local microbial communities and influencing nutrient dynamics in its habitat. Overall, the study of Rhodobacteraceae bacterium AsT-22 offers insights into the diversity and functional potential of bacteria within the Rhodobacteraceae family, highlighting their importance in ecological systems. Understanding its genomic features can help elucidate its role in environmental processes and microbial interactions.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium AsT-22 2-AsT-22_37, whole genome

Gene Summary

Adenine Count

805792 bp

Thymine Count

814453 bp

Guanine Count

1417563 bp

Cytosine Count

1360773 bp

Genome Length

4398588 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-e crispr-associated endonuclease cas1DOO74_15050Not AvailableNegative3069717 - 307059231510.1
type i-e crispr-associated protein cas6/cse3/caseDOO74_15055Not AvailableNegative3070597 - 307133127186.0
type i-e crispr-associated protein cas5/casdDOO74_15060Not AvailableNegative3071328 - 307201725082.9
type i-e crispr-associated protein cas7/cse4/cascDOO74_15065Not AvailableNegative3072014 - 307315340269.7
hypothetical proteinDOO74_15070Not AvailableNegative3073146 - 307367619344.0
crispr-associated helicase/endonuclease cas3DOO74_15080Not AvailableNegative3075179 - 307767191121.3
integraseDOO74_15085Not AvailableNegative3077952 - 307925348269.0
Trna-pseudoNot AvailableNot AvailablePositive3079551 - 3079626Not Available
dipeptidaseDOO74_15090Not AvailableNegative3079973 - 308140053013.5
glutathione abc transporter atp-binding proteinDOO74_15095Not AvailableNegative3081426 - 308348675451.4

Displaying genes 2971 – 2980 of 4200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.