Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic chaperone for outer membrane proteins skp | LV84_00947 | Not Available | Positive | 1068342 - 1068887 | 20096.3 |
| thioredoxin | LV84_00948 | Not Available | Positive | 1069125 - 1069430 | 11524.4 |
| outer membrane protein with beta-barrel domain | LV84_00949 | Not Available | Positive | 1069717 - 1070394 | 25010.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_00950 | Not Available | Positive | 1070498 - 1070992 | 19041.0 |
| hypothetical protein | LV84_00951 | Not Available | Positive | 1070982 - 1071293 | 11983.0 |
| tonb-dependent receptor-like protein | LV84_00952 | Not Available | Positive | 1071306 - 1072103 | 29272.3 |
| hypothetical protein | LV84_00953 | Not Available | Positive | 1072120 - 1072251 | 4960.13 |
| uncharacterized protein (duf885 family) | LV84_00954 | Not Available | Negative | 1072211 - 1073893 | 65049.4 |
| hypothetical protein | LV84_00955 | Not Available | Negative | 1074060 - 1074269 | 7927.89 |
| hypothetical protein | LV84_00956 | Not Available | Negative | 1074282 - 1074815 | 19706.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
