Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | LV84_00937 | Not Available | Negative | 1057351 - 1058625 | 47576.8 |
| hypothetical protein | LV84_00938 | Not Available | Negative | 1058665 - 1059432 | 28831.6 |
| isopenicillin n synthase-like dioxygenase | LV84_00939 | Not Available | Positive | 1059507 - 1060484 | 36675.6 |
| chromate transporter | LV84_00940 | Not Available | Positive | 1060488 - 1061687 | 44315.6 |
| hypothetical protein | LV84_00941 | Not Available | Positive | 1061720 - 1062445 | 27335.7 |
| nad+ kinase | LV84_00942 | Not Available | Positive | 1062449 - 1063324 | 32450.8 |
| outer membrane protein with beta-barrel domain | LV84_00943 | Not Available | Positive | 1063387 - 1064178 | 29643.4 |
| undecaprenyl diphosphate synthase | LV84_00944 | Not Available | Positive | 1064163 - 1064999 | 31426.0 |
| beta-barrel assembly machine subunit bama | LV84_00945 | Not Available | Positive | 1065007 - 1067706 | 101732.0 |
| periplasmic chaperone for outer membrane proteins skp | LV84_00946 | Not Available | Positive | 1067798 - 1068328 | 20620.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
